The Biofilms Structural Database
Name
URIDINE-5'-DIPHOSPHATE
Molecular Weight
404.16
Isomeric SMILES
O[C@@H]1[C@@H](CO[P@](O)(=O)OP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O
Formula
C9H14N2O12P2
Identifiers
[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate
Formal Charge
0
InChI
InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
Atom Count
39
InChIKey
XCCTYIAWTASOJW-XVFCMESISA-N
PDB codes
4DMW, 6OQ7, 7VFL
Type
RNA LINKING
Chiral Atom Count
4
Chiral Atoms
C1', C2', C3', C4'
Bond Count
40
Aromatic Bond Count
Leaving Atoms
O2B